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Computational Complexity


Quantum mechanics


O(n^4) where n = number of orbitals

Eg. In Gaussian 82, 38 Cray hours for dimethyl phosphate, which contains less than 50 atoms


Molecular mechanics


O(M*N) where M is the number of atoms in protein, N is
the number of atoms in a drug molecule

Grid tabulation O(n)


Molecular Dynamics


Molecular mechanics solution as a function of time



Author: NTU CMLAB
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